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Command line for bioinformatics

Fri, Sep 27

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Online (Zoom)

This workshop will include: - Introduction to Shell - Navigation of directories using the command line - Introduction to genomic file types

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Command line for bioinformatics
Command line for bioinformatics

Time & Location

Sep 27, 2024, 11:00 AM – 12:30 PM EDT

Online (Zoom)

About the Event

September 27th 

Command Line for Bioinformatics (NO DEPOSIT REQUIRED FOR THIS DATE). 

Unlock the power of the command line in our hands-on workshop tailored for members of our online community! Join Dr. Rhondene Wint, a seasoned expert in bioinformatics, for an insightful introduction to the command line interface (CLI) and its applications in bioinformatics. Dr. Wint is a certified Data Carpentries instructor. 

In this workshop, you will:

  • Discover the Shell: Gain a foundational understanding of the command line interface, exploring its capabilities and how it streamlines data management and analysis tasks in bioinformatics.
  • Navigate Directories: Learn essential skills for navigating directories and managing files using command-line commands. Mastering these techniques will enhance your efficiency in handling large datasets and performing complex operations.
  • Explore Genomic File Types: Get introduced to various genomic file types commonly used in bioinformatics. Understand their formats, purposes, and how to interact with them using the command line.

NOTE: For the 10/17 and 10/18 dates, a USD $10 deposit is required for the Day 1 and Day 2 workshops with Seqera. It will be refunded upon confirmation of your attendance at the workshops. 

Deposit: no deposit is required for this Day 0 workshop. 

❗️Attend all three (Day 0, Day 1, and Day 2) workshops and receive 15% off your next BWCB merch order!

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To register for future socials:

  • Log in to your BWCB online account (top right of page BWCB Portal Sign-Up > Log In).

  • Go to events.

  • Click on the Second Friday Socials event RSVP button (There's a label that there are Multiple Dates).

  • Under the Time & Location section, click Select Different Date to RSVP for the sessions you're interested in. There will be two sessions for each date.

  • You'll receive a confirmation email, be sure to add the event to your calendar 🗓️.

 

Email programs@blackwomencompbio.org or post a question in #help in Slack with any questions about events. See you all there!

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